Tauber Bioinformatics: Making sense of big data in BIOINFORMATICS

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T-BioInfo areas of analysis:

T-BioInfo is a Bioinformatics platform that combines statistical analysis modules into pipelines to deal with heterogenous big data. Below you will find the areas of analysis our platform can be used for:

mass-spectroscopy

structural biology

data integration and modeling

Transcriptomics

Bulk RNA-seq

Transcriptome Deconvolution to Cell-Types

Denovo transcriptome assembly

RNA editing

Oxford Nanopore

Genomics/Epigenetics

ChIP-seq/chip: analysis of chromatin precipitation data

Bisulfite DNA methylation

Mutation Variant: parallel analysis of Mutation Variant data

CNV segmentation

Denovo genome assembly(In Development)

DNA/RNA

Non-supervised analysis of JunkDNA/RNA : repetitive elements

Repetitive elements: mutation analysis

micro-RNA

Mass-spec proteomics

Mass-spec metabolomics

Mass-spec proteomics (MaxQuant)

CANCER BIOLOGY
Somatic Signatures of Mutations, Deletions, CNVs Analysis Of tumor-norm WGS data CLARET

Single Cell Analysis
Single Cell RNA-seq (Preprocessing) Single Cell RNA-seq Downstream Analysis (Seurat) DEMO: Breast Cancer: Seurat 10X DEMO: Lung Cancer: Seurat 10X Single Cell RNA-seq Downstream Analysis (Bioconductor) (in Development) Spatial Single Cell Analysis (Giotto) In Development

Metagenomics
Metagenomics/Microbiome DEMO: Metagenomics Regular DEMO: SF9 mapping on Viral DB Metagenomics QIIME2 DEMO: Atacama Desert Samples DEMO: Rett Syndrome DEMO: Human Diet Amplicon 16s/18s DEMO: CHOW Vs HFD EXAMPLE: Human Diet DEMO: Rett Syndrome