Dashboard & Results Obatined from Bulk RNA-Seq Data Analysis
RNA-Seq technology provides insights into how cells & tissues function by measuring the levels of gene expression. Since all normal cells within an organism possess the same genome, the differe...
RNA seq on T-BioInfo
RNA-Seq is a technique that performs analysis of transcriptome data generated by next-generation sequencing technologies or by microarrays. Success in analysis of the transcriptome is largely depen...
Transforming the FASTQ files into structured data
Before we can use the methods for advanced analysis, the data found in this collection has to be prepared. The main reason for this is because each one of these samples can be downloaded as a colle...
Quantile Normalization for Gene Expression (RNA-seq) on T BioInfo
Quantile normalization, and other normalization procedures are important to transform distributions between, and amongst, different samples to have the same distribution. Quantile normalization is ...
What is the fastest and most simple pipeline for RNA-seq?
RNA Seq study to interpret biological insights includes various steps but to analyse the data in simple steps, the algorithm Bowtie 2-t could be used which is an ultrafast and memory-efficient tool...
RNA-Seq Practical : From NGS expression table to statistical analysis on T-Bioinfo Server
RNA-Seq (RNA sequencing) is a sequencing technique which uses NGS (next-generation sequencing) to reveal the presence and quantity of RNA in a biological sample at a given moment, analyzing the con...
Bulk RNA Seq Data Analysis: Mapping with Bowtie2 & Generating Expression Table with RSEM
In this video tutorial, you will learn about: In this video tutorial, you will: * Learn how to prepare and run an RNA-Seq pipeline on the T-BioInfo Platform (https://server.t-bio.info/). * Project ...
Bulk RNA-Seq Data Analysis: Mapping with HiSat2 & Quantification with HTseq (Setting up Pipeline)
In this tutorial, you will: * Learn how to set up an alternative RNA-Seq pipeline on the T-BioInfo Platform (https://server.t-bio.info/). * Dataset used for pipeline: Humanized mice with implanted ...
Bulk RNA-Seq Data Analysis: Mapping with HiSat2 and Quantification with HTSeq (Output Overview)
In this tutorial, you will: * Learn about the various outputs that we obtain after running an RNA-Seq pipeline on the T-BioInfo Platform (https://server.t-bio.info/). * Pipeline Workflow: Start &ra...