Differential Expression on T-Bioinfo Server
Identification of differentially expressed genes involves the identification of genes that are differentially expressed in disease. In pharmaceutical and clinical research, DEGs can be valuable to ...
Differential Gene Expression: Bulk RNA Seq Analysis Results (DESEQ2 Output Review)
In this tutorial, you will: * Learn about various outputs we get after performing differential gene expression analysis at the end of RNA-Seq pipeline on the T-BioInfo Platform (https://server.t-bi...
Short tutorial on using T-BioInfo platform to run Gene Set Enrichment Analysis.
Gene set enrichment analysis is a method to identify classes of genes or proteins that are over-represented in a large set of genes or proteins, and may have an association with disease phenotypes....
Annotation & Pathways analysis Pipeline
From the DESeq2 and GSEA analysis module, we can get important information about their biological implications. Besides, if you perform simply T-test or Use EdgeR, you will not get information rega...
Differential Gene Expression Analysis & Biological Annotation Pipeline
There are a number of methods/algorithms that can be applied to scrutinize the significant genes from the RNA expression data. Depending on whether data is normalized or not, these methods can be a...
Differential Gene Expression: Bulk RNA Seq with DESEQ2 on the T-BioInfo Platform (Getting Started)
In this tutorial, you will: * Learn how to run a differential gene expression analysis at the end of a standard RNA-Seq pipeline on the T-BioInfo Platform. * Dataset used for pipeline: Humanized mi...
Differential Gene Expression Analysis: Gene-set Enrichment Analysis (GSEA) (Setting Up Pipeline)
In this tutorial, you will: * Learn how we can conduct differential gene expression analysis on the T-BioInfo Platform (https://server.t-bio.info/). * Project Dataset used for pipeline: Humanized m...
Differential Gene Expression Gene Enrichment Analysis (Output Review)
In this tutorial, you will: * Learn about various outputs that you will get after carrying out differential gene expression analysis on the T-BioInfo Platform (https://server.t-bio.info/). * Output...